Bernaschi, Massimo and Succi, Sauro and Castiglione, Filippo (2000) Large-scale Cellular Automata simulations of the Immune System response.
Published in: Physical Review : E, Statistical, nonlinear, and soft matter physics Vol. 61 (2). pp. 1851-1854.

Radde, Nicole and Gebert, Jutta and Forst, Christian V. (2006) Systematic component selection for gene-network refinement.
Published in: Bioinformatics Vol. 22 (21). pp. 2674-2680.

Kaderali, Lars and Radde, Nicole (2008) Inferring Gene Regulatory Networks from Gene Expression Data.
Published in: Computational Intelligence in Bioinformatics., Studies in Computational Intelligence. 94 Springer 2008.

Radde, Nicole and Gebert, Jutta and Faigle, Ulrich and Schrader, Rainer and Schnetz, Karin (2008) Modeling feedback loops in the H-NS-mediated regulationof the Escherichia coli bgl operon.
Published in: Journal of theoretical biology Vol. 250 (2). 298-306 .

Radde, Nicole and Kaderali, Lars (2009) Inference of an Oscillating Model for the Yeast Cell Cycle.
Published in: Discrete Applied Mathematics Vol. 157 (10). pp. 2285-2295.

Gebert, Jutta and Radde, Nicole and Faigle, Ulrich and Strösser, Julia and Burkovski, Andreas (2009) Modelling and simulation of nitrogen regulation in Corynebacterium glutamicum.
Published in: Discrete Applied Mathematics Vol. 157 (10). pp. 2232-2243.

Radde, Nicole and Kaderali, Lars (2007) Bayesian Inference of Gene Regulatory Networks using Gene Expression Time Series Data.
Published In: Bioinformatics research and development first International Conference, BIRD 2007, Berlin, Germany, March 12-14, 2007 ; proceedings, Lecture Notes in Computer Science. 4414 Springer 2007, pp. 1-15.

Gebert, Jutta and Radde, Nicole (2006) A new approach for modeling prokaryotic biochemical networks with differential equations.
Published In: Computing anticipatory systems : CASYS'05 - seventh international conference ; held in Liege, Belgium, 8 - 13 August 2005 AIP 2006, pp. 526-533.

Gebert, Jutta and Radde, Nicole and Weber, Gerhard-Wilhelm (2007) Modelling Gene Regulatory Networks with Piecewise Linear Differential Equations.
Published in: European Journal of Operational Research Vol. 181 (3). 1148 -1165.