Cupe - the CUBIC Pathway Editor

Gutwenger, Carsten and J√ľnger, Michael and Mutzel, Petra and Percan, Merijam and Schomburg, Dietmar and Schulz, Michael and Schunk, Ralph Oliver and Wagner, Andrea (2006) Cupe - the CUBIC Pathway Editor. Poster at: Graph Drawing 14th International Symposium, GD 2006,,September 18-20, 2006,Karlsruhe, Germany.


Cupe(CUBIC Pathway Editor) is a graphical editor for the automatic or interactive generation and display of metabolic networks. Cupe combines the user guidance by its graphical user interface (GUI) with the ability of automatic graph drawing and the possibility for manual interaction. Furthermore, it provides a programming interface for analysis, simulation and cross linking of reactions. One of the outstanding features of Cupe is its automatic layout mechanism which is provided by utilising the well-known AGD library. The adaptation and development of layout algorithms for the requirements of metabolic networks is an interdisciplinary cooperation between the Department of Computer Science, Cologne University, the Chair of Algorithm Engineering, Dortmund University, and the Cologne University Bioinformatics Center. Poster presentation in 14th International Symposium on Graph Drawing

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  • Divisions: Institute of Computer Science > Computer Science Department - Prof. Dr. Juenger
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      Date Deposited: 27 May 2014 13:14
      Last Modified: 13 Jun 2014 13:06